BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037D04SP1|AL430380
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1655 0.0
>3x_Contig1769
Length = 25795
Score = 1655 bits (830), Expect = 0.0
Identities = 850/864 (98%)
Strand = Plus / Minus
Query: 5 ctcactccatwcgttgtcgtaggtgaatatacggttgtggatgtgtacagtactgttcca 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6739 ctcactccatacgttgtcgtaggtgaatatacggttgtggatgtgtacagtactgttcca 6680
Query: 65 ccatcattattgtatgattctcagcgtgtagctatcgttgtkggaggaagtggaatttca 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6679 ccatcattattgtatgattctcagcgtgtagctatcgttgttggaggaagtggaatttca 6620
Query: 125 ttcgggttgagcatatttaaatacctgcaaaccaggaatttagactatctcaaawtcatc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6619 ttcgggttgagcatatttaaatacctgcaaaccaggaatttagactatctcaaattcatc 6560
Query: 185 tggttgattagagaaagggaagadatgcatatkttgaaccattgtaactttgaaaccaaw 244
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 6559 tggttgattagagaaagggaagatatgcatattttgaaccattgtaactttgaaaccaat 6500
Query: 245 gacttggaagtatatgtcacaagaagcttaccgccagatgatactcaaactaaatctatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6499 gacttggaagtatatgtcacaagaagcttaccgccagatgatactcaaactaaatctatg 6440
Query: 305 aatgcyaatggtagttctgaatttgatgatatcgactttgaattggagacaatggatgag 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6439 aatgctaatggtagttctgaatttgatgatatcgactttgaattggagacaatggatgag 6380
Query: 365 tccggtgctttgctgaccaacgattcgaaatcaccatcgcttgtgcatttcgggagaagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6379 tccggtgctttgctgaccaacgattcgaaatcaccatcgcttgtgcatttcgggagaagg 6320
Query: 425 ttggactggcaggkggatttagctcagttcattgagtcgcacgcacttcaaaacagctgg 484
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6319 ttggactggcaggtggatttagctcagttcattgagtcgcacgcacttcaaaacagctgg 6260
Query: 485 ctagtttgctgtggacctgaatccttgctaactgatggagaaagatatgcaaaacagaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6259 ctagtttgctgtggacctgaatccttgctaactgatggagaaagatatgcaaaacagaac 6200
Query: 545 tactgtaattttgttaaagaattttacgacatatagattgaatctaccaggtttgtaaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6199 tactgtaattttgttaaagaattttacgacatatagattgaatctaccaggtttgtaaaa 6140
Query: 605 ctatttatggtcttcctatttatgaanaaaataacccganntgnaacntaaancagaggt 664
|||||||||||||||||||||||||| |||||||||||| || ||| |||| |||||||
Sbjct: 6139 ctatttatggtcttcctatttatgaataaaataacccgatttgtaacttaaatcagaggt 6080
Query: 665 acagctgccccgtcacctcttttatcacttccagctgcgtatagccaggtattggtctcg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6079 acagctgccccgtcacctcttttatcacttccagctgcgtatagccaggtattggtctcg 6020
Query: 725 ttgtttttagttcttttgataatctgaccacgtccaaatattgatctggacaaacctctt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6019 ttgtttttagttcttttgataatctgaccacgtccaaatattgatctggacaaacctctt 5960
Query: 785 acatattccacttcatgaccgagtttaactaaaccatcaaatacatcttccggtatatct 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5959 acatattccacttcatgaccgagtttaactaaaccatcaaatacatcttccggtatatct 5900
Query: 845 tcctctaactgaatgagagacaca 868
||||||||||||||||||||||||
Sbjct: 5899 tcctctaactgaatgagagacaca 5876
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5173
Number of Sequences: 1807
Number of extensions: 5173
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)